Get QuNex

Container Deployment

To obtain access to the QuNex container please register through the form below. After you complete your registration please follow the instructions outlined here: Quick Start for deploying the QuNex container.

QuNex Source Code

The QuNex suite is open source. For installation guidelines consult the Installing from source and dependencies Wiki.

QuNex Registration Form

QuNex Registration Form

First Name

Last Name

Your e-mail address:

Name of the institution

Position at this Institution

Country of the Institution Afghanistan Aland Islands Albania Algeria American Samoa Andorra Angola Anguilla Antarctica Antigua and Barbuda Argentina Armenia Aruba Australia Austria Azerbaijan Bahamas Bahrain Bangladesh Barbados Belarus Belgium Belize Benin Bermuda Bhutan Bolivia Bonaire, Sint Eustatius and Saba Bosnia and Herzegovina Botswana Bouvet Island Brazil British Indian Ocean Territory Brunei Bulgaria Burkina Faso Burundi Côte d'Ivoire Cambodia Cameroon Canada Cape Verde Cayman Islands Central African Republic Chad Chile China Christmas Island Cocos (Keeling) Islands Colombia Comoros Congo Cook Islands Costa Rica Croatia Cuba Curacao Cyprus Czech Republic Denmark Djibouti Dominica Dominican Republic East Timor Ecuador Egypt El Salvador Equatorial Guinea Eritrea Estonia Ethiopia Falkland Islands (Malvinas) Faroe Islands Fiji Finland France French Guiana French Polynesia French Southern Territories Gabon Gambia Georgia Germany Ghana Gibraltar Greece Greenland Grenada Guadeloupe Guam Guatemala Guernsey Guinea Guinea-Bissau Guyana Haiti Heard Island and McDonald Islands Holy See Honduras Hong Kong Hungary Iceland India Indonesia Iran Iraq Ireland Isle of Man Israel Italy Jamaica Japan Jersey Jordan Kazakhstan Kenya Kiribati Kosovo Kuwait Kyrgyzstan Laos Latvia Lebanon Lesotho Liberia Libya Liechtenstein Lithuania Luxembourg Macao Macedonia Madagascar Malawi Malaysia Maldives Mali Malta Marshall Islands Martinique Mauritania Mauritius Mayotte Mexico Micronesia Moldova Monaco Mongolia Montenegro Montserrat Morocco Mozambique Myanmar Namibia Nauru Nepal Netherlands New Caledonia New Zealand Nicaragua Niger Nigeria Niue Norfolk Island North Korea Northern Mariana Islands Norway Oman Pakistan Palau Palestine Panama Papua New Guinea Paraguay Peru Philippines Pitcairn Poland Portugal Puerto Rico Qatar Reunion Romania Russia Rwanda Saint Barthelemy Saint Helena, Ascension and Tristan da Cunha Saint Kitts and Nevis Saint Lucia Saint Martin (French part) Saint Pierre and Miquelon Saint Vincent and the Grenadines Samoa San Marino Sao Tome and Principe Saudi Arabia Senegal Serbia Seychelles Sierra Leone Singapore Sint Maarten (Dutch part) Slovakia Slovenia Solomon Islands Somalia South Africa South Georgia and the South Sandwich Islands South Korea South Sudan Spain Sri Lanka Sudan Suriname Svalbard and Jan Mayen Swaziland Sweden Switzerland Syria Taiwan Tajikistan Tanzania Thailand Timor-Leste Togo Tokelau Tonga Trinidad and Tobago Tunisia Turkey Turkmenistan Turks and Caicos Islands Tuvalu Uganda Ukraine United Arab Emirates United Kingdom United States United States Minor Outlying Islands Uruguay Uzbekistan Vanuatu Vatican City Venezuela Vietnam Virgin Islands, British Virgin Islands, U.S. Wallis and Futuna Western Sahara Yemen Zambia Zimbabwe

Type of institution which will use this software (if you are interested in using QuNex commercially, please contact Anticevic Lab or MBLab):

non-profit education/research

medical

commercial

Your mailing address:

Your mailing address:

Your mailing address:

Your mailing address:

City

City

State/Province

State/Province

Zip/Postal

Zip/Postal

Country Afghanistan Aland Islands Albania Algeria American Samoa Andorra Angola Anguilla Antarctica Antigua and Barbuda Argentina Armenia Aruba Australia Austria Azerbaijan Bahamas Bahrain Bangladesh Barbados Belarus Belgium Belize Benin Bermuda Bhutan Bolivia Bonaire, Sint Eustatius and Saba Bosnia and Herzegovina Botswana Bouvet Island Brazil British Indian Ocean Territory Brunei Bulgaria Burkina Faso Burundi Côte d'Ivoire Cambodia Cameroon Canada Cape Verde Cayman Islands Central African Republic Chad Chile China Christmas Island Cocos (Keeling) Islands Colombia Comoros Congo Cook Islands Costa Rica Croatia Cuba Curacao Cyprus Czech Republic Denmark Djibouti Dominica Dominican Republic East Timor Ecuador Egypt El Salvador Equatorial Guinea Eritrea Estonia Ethiopia Falkland Islands (Malvinas) Faroe Islands Fiji Finland France French Guiana French Polynesia French Southern Territories Gabon Gambia Georgia Germany Ghana Gibraltar Greece Greenland Grenada Guadeloupe Guam Guatemala Guernsey Guinea Guinea-Bissau Guyana Haiti Heard Island and McDonald Islands Holy See Honduras Hong Kong Hungary Iceland India Indonesia Iran Iraq Ireland Isle of Man Israel Italy Jamaica Japan Jersey Jordan Kazakhstan Kenya Kiribati Kosovo Kuwait Kyrgyzstan Laos Latvia Lebanon Lesotho Liberia Libya Liechtenstein Lithuania Luxembourg Macao Macedonia Madagascar Malawi Malaysia Maldives Mali Malta Marshall Islands Martinique Mauritania Mauritius Mayotte Mexico Micronesia Moldova Monaco Mongolia Montenegro Montserrat Morocco Mozambique Myanmar Namibia Nauru Nepal Netherlands New Caledonia New Zealand Nicaragua Niger Nigeria Niue Norfolk Island North Korea Northern Mariana Islands Norway Oman Pakistan Palau Palestine Panama Papua New Guinea Paraguay Peru Philippines Pitcairn Poland Portugal Puerto Rico Qatar Reunion Romania Russia Rwanda Saint Barthelemy Saint Helena, Ascension and Tristan da Cunha Saint Kitts and Nevis Saint Lucia Saint Martin (French part) Saint Pierre and Miquelon Saint Vincent and the Grenadines Samoa San Marino Sao Tome and Principe Saudi Arabia Senegal Serbia Seychelles Sierra Leone Singapore Sint Maarten (Dutch part) Slovakia Slovenia Solomon Islands Somalia South Africa South Georgia and the South Sandwich Islands South Korea South Sudan Spain Sri Lanka Sudan Suriname Svalbard and Jan Mayen Swaziland Sweden Switzerland Syria Taiwan Tajikistan Tanzania Thailand Timor-Leste Togo Tokelau Tonga Trinidad and Tobago Tunisia Turkey Turkmenistan Turks and Caicos Islands Tuvalu Uganda Ukraine United Arab Emirates United Kingdom United States United States Minor Outlying Islands Uruguay Uzbekistan Vanuatu Vatican City Venezuela Vietnam Virgin Islands, British Virgin Islands, U.S. Wallis and Futuna Western Sahara Yemen Zambia Zimbabwe

Country

Select type of requested access

QuNex source code and Docker container access

QuNex Docker container access only

QuNex source code access only

Operating System/Platform Linux Windows macOS

Estimated number of users of the software

(List 1 if you are only installing for yourself, otherwise please provide the estimate of the number of users )

Are you interested in collaborating on QuNex co-development?

Yes

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QuNex Extensions License Agreement: Quantitative Neuroimaging Environment & ToolboX (Qu|Nex) Extensions License Agreement (“AGREEMENT”) Copyright (c) 2022 Respective contributors from: Cho Lab, Yale University Mind & Brain Lab, University of Ljubljana (collectively, “AUTHORS”). By registering for downloads of the Quantitative Neuroimaging Environment and ToolboX (Qu|Nex), you are hereby agreeing to the following terms and conditions for your and your authorized organization’s download and use of the Qu|Nex Extensions framework (“EXTENSIONS”). If you do not agree to these terms and conditions, please do not register, download or otherwise use the EXTENSIONS. Permission for use of the EXTENSIONS is hereby granted without charge for non-commercial research purposes only. You are not permitted under this AGREEMENT to use the EXTENSIONS commercially. Use for which any financial return is received shall be defined as commercial use, and includes, but is not limited to: (1) integration of all or part of the EXTENSIONS into a product or service for sale or license to third parties by you or on your or your organization’s behalf; or (2) use of the EXTENSIONS or any derivative of it, in whole or in part, for research with an aim of developing software products or services for sale or license to a third party; or (3) use of the EXTENSIONS or any derivative of it, in whole or in part, for research with an aim of developing non-software products or services for sale or license to a third party; or (4) use of any portion of the EXTENSIONS to provide any service to any other individual or organization from which payment is received. If you are interested in using the EXTENSIONS commercially, please contact either: Yale University Office of Cooperative Research http://ocr.yale.edu/ or University of Ljubljana Intellectual Property Office intelektualna.lastnina@uni-lj.si to negotiate a commercial use license. You agree to indemnify the AUTHORS, their respective institutions and the employees, officers, agents and/or representatives thereof (collectively, the “Indemnified Parties”) and hold the Indemnified Parties harmless from and against any and all claims, damages and liabilities asserted by third parties (including claims for negligence) which arise directly or indirectly from your or your organization’s use and/or distribution of the EXTENSIONS in any manner or form [or the sale of any products based on the EXTENSIONS]. THE EXTENSIONS ARE PROVIDED HEREUNDER “AS IS” AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, TITLE, NON-INFRINGEMENT, AND FITNESS FOR A PARTICULAR PURPOSE ARE HEREBY EXPRESSLY DISCLAIMED. IN NO EVENT SHALL THE AUTHORS NOR ANY OF THE AUTHOR PARTIES BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF EXTENSIONS, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. You may publish papers and books using results produced using the EXTENSIONS provided by this AGREEMENT provided that you reference the appropriate citations to the AUTHORS. None of the names, logos or trademarks of the AUTHORS, the EXTENSIONS, nor those of any of their respective institutions or affiliates, or any funding agency (collectively, “Author Parties”) may be used to endorse or promote your or your organization’s papers, books, results produced using the EXTENSIONS, or any other uses, statements or publications relating to the EXTENSIONS without specific prior written permission from the applicable party. You may not duplicate, copy, or reuse any portion of the look and feel or visual design of the EXTENSIONS or associated materials on this website without express written permission from the applicable party.

I have read & agree to the QuNex Extensions License terms *

I Accept QuNex Extensions License Terms

QuNex Container License Agreement: Quantitative Neuroimaging Environment & ToolboX (Qu|Nex) Container License Agreement (“AGREEMENT”) Copyright (c) 2021 Respective contributors from: Cho Lab, Yale University Mind & Brain Lab, University of Ljubljana (collectively, “AUTHORS”). By registering for downloads of the Quantitative Neuroimaging Environment and ToolboX (Qu|Nex) Container, you are hereby agreeing to the following terms and conditions for your and your authorized organization’s download and use of the Qu|Nex Container Layer software (“CONTAINER”). If you do not agree to these terms and conditions, please do not register, download or otherwise use the CONTAINER. While the suite of source code(s) for the Container is licensed and made available by AUTHORS free and open sourced under a GPL license (https://www.gnu.org/licenses/gpl-3.0.en.html), the CONTAINER itself and the associated code(s) are and shall remain proprietary to the AUTHORS. As between you and the AUTHORS, the AUTHORS retain ownership of any and all intellectual property and proprietary rights in and to the CONTAINER and the AUTHORS reserve all rights that are not expressly granted to you under this AGREEMENT. Permission for use of the CONTAINER is hereby granted without charge for non-commercial research purposes only. You are not permitted under this AGREEMENT to use this CONTAINER commercially. Use for which any financial return is received shall be defined as commercial use, and includes, but is not limited to: (1) integration of all or part of the CONTAINER into a product or service for sale or license to third parties by you or on your or your organization’s behalf; or (2) use of the CONTAINER or any derivative of it, in whole or in part, for research with an aim of developing software products or services for sale or license to a third party; or (3) use of the CONTAINER or any derivative of it, in whole or in part, for research with an aim of developing non-software products or services for sale or license to a third party; or (4) use of any portion of the CONTAINER to provide any service to any other individual or organization from which payment is received. If you are interested in using the CONTAINER commercially, please contact either: Yale University Office of Cooperative Research http://ocr.yale.edu/ or University of Ljubljana Intellectual Property Office intelektualna.lastnina@uni-lj.si to negotiate a commercial use license. NO PART OF THE CONTAINER MAY BE MODIFIED, REPRODUCED, DISTRIBUTED, TRANSMITTED OR TRANSFERRED, including any copies of this CONTAINER or DERIVATIVES of this CONTAINER, to others outside your organization without specific prior written permission from the AUTHORS. Other than the rights expressly granted herein, as between you and AUTHORS, the AUTHORS retain all rights, title, and interest in and to the CONTAINER. You may be held legally responsible for any copyright infringement that is caused or encouraged by your failure, act and/or omission to abide by these terms and conditions. If you provide use of the CONTAINER to other users within your authorized organization or unit, they also must comply with all the terms of this AGREEMENT and you and your organization are fully responsible for ensuring that such terms are adhered to by them. You must not remove or alter any copyright or other proprietary notices in the CONTAINER. The CONTAINER has been designed for non-commercial research purposes only and has not been reviewed or approved by any federal, state or local governmental or regulatory agency. YOU ACKNOWLEDGE AND AGREE THAT CLINICAL APPLICATIONS ARE NEITHER RECOMMENDED NOR ADVISED. You agree to indemnify the AUTHORS, their respective institutions and the employees, officers, agents and/or representatives thereof (collectively, the “Indemnified Parties”) and hold the Indemnified Parties harmless from and against any and all claims, damages and liabilities asserted by third parties (including claims for negligence) which arise directly or indirectly from your or your organization’s use and/or distribution of the CONTAINER in any manner or form [or the sale of any products based on the CONTAINER]. THE CONTAINER IS PROVIDED HEREUNDER “AS IS” AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, TITLE, NON-INFRINGEMENT, AND FITNESS FOR A PARTICULAR PURPOSE ARE HEREBY EXPRESSLY DISCLAIMED. IN NO EVENT SHALL THE AUTHORS NOR ANY OF THE AUTHOR PARTIES BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS CONTAINER, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. You may publish papers and books using results produced using the CONTAINER provided by this AGREEMENT provided that you reference the appropriate citations to the AUTHORS. None of the names, logos or trademarks of the AUTHORS, the CONTAINER, nor those of any of their respective institutions or affiliates, or any funding agency (collectively, “Author Parties”) may be used to endorse or promote your or your organization’s papers, books, results produced using the CONTAINER, or any other uses, statements or publications relating to the CONTAINER without specific prior written permission from the applicable party. You may not duplicate, copy, or reuse any portion of the look and feel or visual design of the CONTAINER or associated materials on this website without express written permission from the applicable party.

I have read & agree to the QuNex Container License terms

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FreeSurfer License Agreement Version 1.0, February 2011 This Agreement covers contributions to and downloads from the FreeSurfer project (“FreeSurfer”) maintained by The General Hospital Corporation, Boston MA, USA (“MGH”). Part A of this Agreement applies to contributions of software and/or data to FreeSurfer (including making revisions of or additions to code and/or data already in FreeSurfer). Part B of this Agreement applies to downloads of software and/or data from FreeSurfer. Part C of this Agreement applies to all transactions with FreeSurfer. If you distribute Software (as defined below) downloaded from FreeSurfer, all of the paragraphs of Part B of this Agreement must be included with and apply to such Software. 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FSL Software License FSL Software License Version v6 2018 FMRIB Software Library, Release 6.0 (c) 2018, The University of Oxford (the “Software”) The Software remains the property of Oxford University Innovation (“the University”). The Software is distributed “AS IS” under this Licence solely for non-commercial use in the hope that it will be useful, but in order that the University as a charitable foundation protects its assets for the benefit of its educational and research purposes, the University makes clear that no condition is made or to be implied, nor is any warranty given or to be implied, as to the accuracy of the Software, or that it will be suitable for any particular purpose or for use under any specific conditions. Furthermore, the University disclaims all responsibility for the use which is made of the Software. It further disclaims any liability for the outcomes arising from using the Software. The Licensee agrees to indemnify the University and hold the University harmless from and against any and all claims, damages and liabilities asserted by third parties (including claims for negligence) which arise directly or indirectly from the use of the Software or the sale of any products based on the Software. No part of the Software may be reproduced, modified, transmitted or transferred in any form or by any means, electronic or mechanical, without the express permission of the University. The permission of the University is not required if the said reproduction, modification, transmission or transference is done without financial return, the conditions of this Licence are imposed upon the receiver of the product, and all original and amended source code is included in any transmitted product. You may be held legally responsible for any copyright infringement that is caused or encouraged by your failure to abide by these terms and conditions. You are not permitted under this Licence to use this Software commercially. Use for which any financial return is received shall be defined as commercial use, and includes (1) integration of all or part of the source code or the Software into a product for sale or license by or on behalf of Licensee to third parties or (2) use of the Software or any derivative of it for research with the final aim of developing software products for sale or license to a third party or (3) use of the Software or any derivative of it for research with the final aim of developing non-software products for sale or license to a third party, or (4) use of the Software to provide any service to an external organisation for which payment is received. If you are interested in using the Software commercially, please contact Oxford University Innovation (“OUI”), the technology transfer company of the University, to negotiate a licence. Contact details are: fsl@innovation.ox.ac.uk quoting Reference Project 9564, FSL. ——————————————————————- The Standard Space Atlases The Cerebellum, Harvard-Oxford, JHU, Juelich, Striatum and Thalamus atlases, whilst not being the property of Oxford, are released under the terms of the main FSL licence above, at the request of their owners. These atlases should therefore not be used for commercial purposes; for such purposes please contact the primary co-ordinator for the relevant atlas: Harvard-Oxford: steve@fmrib.ox.ac.uk JHU: susumu@mri.jhu.edu Juelich: S.Eickhoff@fz-juelich.de Thalamus: behrens@fmrib.ox.ac.uk Cerebellum: j.diedrichsen@bangor.ac.uk Striatum: andri.tziortzi@gmail.com ——————————————————————- FSLView FSLView sources are released under the terms of the GPLv2 (http://www.gnu.org/licenses/old-licenses/gpl-2.0.html). FSLView binaries use Qt (http://qt.nokia.com) which is released under LGPLv2.1. The FSLView binaries are released under the GPL, with the added exception that we also give permission to link this program with the Qt non-commercial edition, and distribute the resulting executable, without including the source code for the Qt non-commercial edition in the source distribution. FSLView is distributed “AS IS” under this Licence in the hope that it will be useful, but in order that the University as a charitable foundation protects its assets for the benefit of its educational and research purposes, the University makes clear that no condition is made or to be implied, nor is any warranty given or to be implied, as to the accuracy of the Software, or that it will be suitable for any particular purpose or for use under any specific conditions. Furthermore, the University disclaims all responsibility for the use which is made of the Software. It further disclaims any liability for the outcomes arising from using the Software.

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